RNA Folding

Click on the following link to view the publications chronologically.  Chronological

Click on the links below to view the publications organized by topic.

Methods Development   |   Ions Around DNA and RNA   |   DNA and RNA Condensation

DNA-DNA Interactions   |   RNA Folding   |   Conformational Dynamics of Proteins

Protein-Nucleic Acid Interactions   |   RNA Structure

Publications

Tuning RNA Flexibility with Helix Length and Junction Sequence.
J. L. Sutton, L. Pollack
Biophys. J. 109(12):2644-53 (2015). [Abstract]

Role of ion valence in the submillisecond collapse and folding of a small RNA domain.
S. A. Pabit, J. L. Sutton, H. Chen, L. Pollack
Biochemistry. 52(9):1539-46 (2013). [Abstract]

Pyrite footprinting of RNA
J. C. Schlatterer, M. S. Wieder, C. D. Jones, L. Pollack, M. Brenowitz
Biochem. Biophys. Res. Commun. 425(2):374-8 (2012). [Abstract]

Hinge stiffness is a barrier to RNA folding
J. Schlatterer, L.W. Kwok, J.S. Lamb, H.Y. Park, K. Andresen, M. Brenowitz and L. Pollack
J. Mol. Biol. 379, 859 (2008). [Abstract]

Concordant measurements of folding kinetics from local and global perspective
L.W. Kwok, I.Shcherbakova, J.S. Lamb, H.Y. Park, K. Andresen, H. Smith, M. Brenowitz and L. Pollack, J. Mol. Biol., 355, 282 (2006).

The fastest global events in RNA folding

R. Das, L.W. Kwok, I.S.  Millett, Y. Bai, T.T. Mills, J. Jacob, G.S.  Maskel, S. Seifert, S.G.J. Mochrie, P. Thiyagarajan, S.  Doniach, L. Pollack, and D. Herschlag
J. Mol. Biol., 332, 311 (2003). [Abstract]

Rapid compaction during RNA folding
R. Russell, I. S. Mil.ett, M. W. Tate, L. W. Kwok, B. Nakatani, S. M. Gruner, S. G. J. Mochrine, V. Pande, S. Doniach, D. Herschlag, and L. Pollack
Proc. Natl. Acad. Sci. 99, p. 4266 (2002). [Abstract]